mgkit.workflow.fasta_utils module¶
New in version 0.3.0.
Scripts that includes some functionality to help use FASTA files with the framework
split command¶
Used to split a fasta file into smaller fragments
translate command¶
Used to translate nucleotide sequences into amino acids.
uid command¶
Used to change a FASTA file headers to a unique ID. A table (tab separated) with the changes made can be kept, using the –table option.
Changes¶
New in version 0.3.0.
Changed in version 0.3.1: added translate and uid command
Changed in version 0.3.4: ported to click